ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1e08A3 - ECOD Domain | ECOD

ECOD/Domains/e1e08A3

e1e08A3

UID: 000958176

PDB

Range: A:87-389
PDB: 1E08 chain A(all domains)
UniProt: P07598 (all domains)
Gene: hydA

Molecule: [FE]-HYDROGENASE (LARGE SUBUNIT)

3D Structure

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Related Domains

Browse other domains in Fe_hyd_lg_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFe-only hydrogenase(7556)

HH-groupFe-only hydrogenase(7556.1)

TT-groupFe-only hydrogenase(7556.1.1)

FFamilyFe_hyd_lg_C(7556.1.1.1)

Ligands

in contact, ≤ 4 Å

Carbon monoxideCMO
drugDrugBank DB11588
Cyanide ionCYN
FE (II) IONFE2

Pfam Families

PF02906Fe_hyd_lg_C

Iron only hydrogenase large subunit, C-terminal domain

External Links

ECOD PDB View: 1E08 RCSB PDB: 1E08 PDBe: 1E08 UniProt: P07598

Downloads

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metal

1,3-PROPANEDITHIOLPDT

Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.