ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dnfB2 - ECOD Domain | ECOD

ECOD/Domains/e3dnfB2

e3dnfB2

UID: 000959011

PDB

Range: B:96-192
PDB: 3DNF chain B(all domains)
UniProt: O67625 (all domains)
Gene: ispH

Molecule: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase

3D Structure

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Related Domains

Browse other domains in LYTB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588)

HH-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588.1)

TT-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588.1.1)

FFamilyLYTB(7588.1.1.1)

Ligands

in contact, ≤ 4 Å

FE3-S4 CLUSTERF3S

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

LytB protein

External Links

ECOD PDB View: 3DNF RCSB PDB: 3DNF PDBe: 3DNF UniProt: O67625

Downloads

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