ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3tkwA1 - ECOD Domain | ECOD

ECOD/Domains/e3tkwA1

e3tkwA1

UID: 000959448

PDB

Range: A:-3-99
PDB: 3TKW chain A(all domains)
UniProt: P03366 (all domains)
Gene: gag-pol

Molecule: Protease

3D Structure

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Related Domains

Browse other domains in RVP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyRVP(1.1.1.3)

Ligands

in contact, ≤ 4 Å

Darunavir017
drugDrugBank DB01264
Chloride ionCL
Sodium ionNA

Pfam Families

Retroviral aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 3TKW RCSB PDB: 3TKW PDBe: 3TKW UniProt: P03366

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.