ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nrjB1 - ECOD Domain | ECOD

ECOD/Domains/e1nrjB1

e1nrjB1

UID: 000009595

RepresentativePDB

Range: B:36-244
PDB: 1NRJ chain B(all domains)
UniProt: P36057 (all domains)
Gene: SRP102

Molecule: Signal recognition particle receptor beta subunit

3D Structure

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Related Domains

Browse other domains in SRPRB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySRPRB(2004.1.1.168)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
Magnesium ionMG
metal

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

Signal recognition particle receptor beta subunit

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1NRJ RCSB PDB: 1NRJ PDBe: 1NRJ UniProt: P36057

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.