ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1lolB1 - ECOD Domain | ECOD

ECOD/Domains/e1lolB1

e1lolB1

UID: 000095954

PDB

Range: B:1011-1222
PDB: 1LOL chain B(all domains)
UniProt: O26232 (all domains)
Gene: pyrF

Molecule: orotidine 5'-monophosphate decarboxylase

3D Structure

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Related Domains

Browse other domains in OMPdecase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOMPdecase(2002.1.1.9)

Ligands

in contact, ≤ 4 Å

5-monophosphate-9-beta-D-ribofuranosyl xanthineXMP
drugDrugBank DB02309

+ 1 additive ((S)-butane-1,3-diol)

(S)-butane-1,3-diolBU2
DrugBank DB02202

Pfam Families

PF00215OMPdecase

Orotidine 5'-phosphate decarboxylase / HUMPS family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1LOL RCSB PDB: 1LOL PDBe: 1LOL UniProt: O26232

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.