ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2bq1E2 - ECOD Domain | ECOD

ECOD/Domains/e2bq1E2

e2bq1E2

UID: 000096381

PDB

Range: E:175-699
PDB: 2BQ1 chain E(all domains)
UniProt: Q08698 (all domains)
Gene: nrdE

Molecule: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 2 ALPHA SUBUNIT

3D Structure

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Related Domains

Browse other domains in Ribonuc_red_lgC →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTen stranded beta/alpha barrel(2500)

HH-groupTen stranded beta/alpha barrel(2500.1)

TT-groupTen stranded beta/alpha barrel(2500.1.1)

FFamilyRibonuc_red_lgC(2500.1.1.2)

Ligands

in contact, ≤ 4 Å

2'-Deoxyguanosine-5'-TriphosphateDGT
drugDrugBank DB02181
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF02867Ribonuc_red_lgC

Ribonucleotide reductase, barrel domain

ClanCL0339PFL-like

External Links

ECOD PDB View: 2BQ1 RCSB PDB: 2BQ1 PDBe: 2BQ1 UniProt: Q08698

Downloads

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Drug annotations from DrugDomain.