ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1peoA2 - ECOD Domain | ECOD

ECOD/Domains/e1peoA2

e1peoA2

UID: 000096382

PDB

Range: A:175-699
PDB: 1PEO chain A(all domains)
UniProt: Q08698 (all domains)
Gene: nrdE

Molecule: Ribonucleoside-diphosphate reductase 2 alpha chain

3D Structure

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Related Domains

Browse other domains in Ribonuc_red_lgC →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTen stranded beta/alpha barrel(2500)

HH-groupTen stranded beta/alpha barrel(2500.1)

TT-groupTen stranded beta/alpha barrel(2500.1.1)

FFamilyRibonuc_red_lgC(2500.1.1.2)

Ligands

in contact, ≤ 4 Å

2'-Deoxycytidine 5'-triphosphateDCP
drugDrugBank DB03258
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF02867Ribonuc_red_lgC

Ribonucleotide reductase, barrel domain

ClanCL0339PFL-like

External Links

ECOD PDB View: 1PEO RCSB PDB: 1PEO PDBe: 1PEO UniProt: Q08698

Downloads

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Drug annotations from DrugDomain.