ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1h79A1 - ECOD Domain | ECOD

ECOD/Domains/e1h79A1

e1h79A1

UID: 000096386

PDB

Range: A:27-585
PDB: 1H79 chain A(all domains)
UniProt: P07071 (all domains)
Gene: nrdD

Molecule: ANAEROBIC RIBONUCLEOTIDE-TRIPHOSPHATE REDUCTASE LARGE CHAIN

3D Structure

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Related Domains

Browse other domains in Gly_radical, NRDD →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTen stranded beta/alpha barrel(2500)

HH-groupTen stranded beta/alpha barrel(2500.1)

TT-groupTen stranded beta/alpha barrel(2500.1.1)

FFamilyGly_radical, NRDD(2500.1.1.7)

Ligands

in contact, ≤ 4 Å

Thymidine 5'-triphosphateTTP
drugDrugBank DB02452
FE (II) IONFE2
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01228Gly_radical

Glycine radical

ClanCL0339PFL-like

Anaerobic ribonucleoside-triphosphate reductase

ClanCL0339PFL-like

External Links

ECOD PDB View: 1H79 RCSB PDB: 1H79 PDBe: 1H79 UniProt: P07071

Downloads

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