ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gkiH1 - ECOD Domain | ECOD

ECOD/Domains/e4gkiH1

e4gkiH1

UID: 000963932

PDB

Range: H:0-249
PDB: 4GKI chain H(all domains)
UniProt: B0VD92 (all domains)

Molecule: Aminoglycoside 3'-phosphotransferase AphA1-IAB

3D Structure

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Related Domains

Browse other domains in APH →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyAPH(206.1.1.11)

Ligands

in contact, ≤ 4 Å

KanamycinKAN
drugDrugBank DB01172
1-tert-butyl-3-(naphthalen-1-ylmethyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine0JN
Sodium ionNA

Pfam Families

Phosphotransferase enzyme family

ClanCL0016PKinase

External Links

ECOD PDB View: 4GKI RCSB PDB: 4GKI PDBe: 4GKI UniProt: B0VD92

Downloads

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metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.