ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rooB1 - ECOD Domain | ECOD

ECOD/Domains/e3rooB1

e3rooB1

UID: 000964025

PDB

Range: B:1-99
PDB: 3ROO chain B(all domains)
UniProt: P01887 (all domains)
Gene: B2m

Molecule: Beta-2-microglobulin

3D Structure

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Related Domains

Browse other domains in C1-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyC1-set(11.1.1.96)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, (4r)-2-Methylpentane-2,4-Diol, Phosphate ion)

GlycerinGOL
DrugBank DB09462
(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
Phosphate ion

Pfam Families

Immunoglobulin C1-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 3ROO RCSB PDB: 3ROO PDBe: 3ROO UniProt: P01887

Downloads

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DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.