ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jj7A1 - ECOD Domain | ECOD

ECOD/Domains/e1jj7A1

e1jj7A1

UID: 000009682

RepresentativePDB

Range: A:492-742
PDB: 1JJ7 chain A(all domains)
UniProt: Q03518 (all domains)
Gene: TAP1

Molecule: PEPTIDE TRANSPORTER TAP1

3D Structure

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Related Domains

Browse other domains in ABC_tran →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyABC_tran(2004.1.1.5)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00005ABC_tran

ABC transporter

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1JJ7 RCSB PDB: 1JJ7 PDBe: 1JJ7 UniProt: Q03518

Downloads

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