ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gmsE1 - ECOD Domain | ECOD

ECOD/Domains/e4gmsE1

e4gmsE1

UID: 000968393

PDB

Range: E:10-319
PDB: 4GMS chain E(all domains)
UniProt: P03435 (all domains)
Gene: HA

Molecule: Hemagglutinin HA1 chain

3D Structure

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Related Domains

Browse other domains in Hemagglutinin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupViral protein domain(10.5)

TT-groupViral protein domain(10.5.1)

FFamilyHemagglutinin(10.5.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

+ 2 additives (Sulfate ion, Tetraethylene glycol)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF00509Hemagglutinin

Haemagglutinin

External Links

ECOD PDB View: 4GMS RCSB PDB: 4GMS PDBe: 4GMS UniProt: P03435

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.