ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3tpxC1 - ECOD Domain | ECOD

ECOD/Domains/e3tpxC1

e3tpxC1

UID: 000971449

PDB

Range: C:25-108
PDB: 3TPX chain C(all domains)
UniProt: Q00987 (all domains)
Gene: MDM2

Molecule: E3 ubiquitin-protein ligase Mdm2

3D Structure

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Related Domains

Browse other domains in SWIB →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSWIB/MDM2 domain(178)

HH-groupSWIB/MDM2 domain(178.1)

TT-groupSWIB/MDM2 domain(178.1.1)

FFamilySWIB(178.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
within 5 Å only

+ 2 additives (Acetate, Sulfate ion)

AcetateACT
DrugBank DB14511within 5 Å only
Sulfate ion

Pfam Families

SWIB/MDM2 domain

ClanCL0906SWIB

External Links

ECOD PDB View: 3TPX RCSB PDB: 3TPX PDBe: 3TPX UniProt: Q00987

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.