ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vi5D2 - ECOD Domain | ECOD

ECOD/Domains/e3vi5D2

e3vi5D2

UID: 000971918

PDB

Range: D:602-673
PDB: 3VI5 chain D(all domains)
UniProt: O60760 (all domains)
Gene: HPGDS

Molecule: Hematopoietic prostaglandin D synthase

3D Structure

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Related Domains

Browse other domains in GST_N →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupThioredoxin-like(2485.1)

TT-groupThioredoxin-like(2485.1.1)

FFamilyGST_N(2485.1.1.13)

Ligands

in contact, ≤ 4 Å

1-amino-9,10-dioxo-4-[(4-sulfamoylphenyl)amino]-9,10-dihydroanthracene-2-sulfonic acidM4M
Calcium ionCA
metalwithin 5 Å only

+ 1 additive (Glycerin)

Glycerin

Pfam Families

Glutathione S-transferase, N-terminal domain

ClanCL0172Thioredoxin

External Links

ECOD PDB View: 3VI5 RCSB PDB: 3VI5 PDBe: 3VI5 UniProt: O60760

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.