ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4b5uB1 - ECOD Domain | ECOD

ECOD/Domains/e4b5uB1

e4b5uB1

UID: 000972933

PDB

Range: B:1-251
PDB: 4B5U chain B(all domains)
UniProt: B1IS70 (all domains)
Gene: hpcH

Molecule: 4-HYDROXY-2-OXO-HEPTANE-1,7-DIOATE ALDOLASE

3D Structure

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Related Domains

Browse other domains in HpcH_HpaI →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyHpcH_HpaI(2002.1.1.111)

Ligands

in contact, ≤ 4 Å

Pyruvic acidPYR
drugDrugBank DB00119
COBALT (II) IONCO
metal
Magnesium ionMG

Pfam Families

PF03328HpcH_HpaI

HpcH/HpaI aldolase/citrate lyase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4B5U RCSB PDB: 4B5U PDBe: 4B5U UniProt: B1IS70

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

4-oxobutanoic acidSSN

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.