ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yb1B1 - ECOD Domain | ECOD

ECOD/Domains/e1yb1B1

e1yb1B1

UID: 000097339

PDB

Range: B:25-268
PDB: 1YB1 chain B(all domains)
UniProt: Q8NBQ5 (all domains)
Gene: HSD17B11

Molecule: 17-beta-hydroxysteroid dehydrogenase type XI

3D Structure

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Related Domains

Browse other domains in adh_short →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyadh_short(2003.1.1.3)

Ligands

in contact, ≤ 4 Å

AndrosteroneAOI
within 5 Å only
Chloride ionCL
within 5 Å only

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL

Pfam Families

PF00106adh_short

short chain dehydrogenase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1YB1 RCSB PDB: 1YB1 PDBe: 1YB1 UniProt: Q8NBQ5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.