ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2c59A1 - ECOD Domain | ECOD

ECOD/Domains/e2c59A1

e2c59A1

UID: 000097358

PDB

Range: A:13-375
PDB: 2C59 chain A(all domains)
UniProt: Q93VR3 (all domains)
Gene: At5g28840

Molecule: GDP-MANNOSE-3', 5'-EPIMERASE

3D Structure

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Related Domains

Browse other domains in Epimerase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyEpimerase(2003.1.1.20)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
GUANOSINE-5'-DIPHOSPHATE-BETA-L-GALACTOSEGDC
GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSEGDD

Pfam Families

PF01370Epimerase

NAD dependent epimerase/dehydratase family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2C59 RCSB PDB: 2C59 PDBe: 2C59 UniProt: Q93VR3

Downloads

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+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.