ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rdbA1 - ECOD Domain | ECOD

ECOD/Domains/e3rdbA1

e3rdbA1

UID: 000973864

PDB

Range: A:44-205
PDB: 3RDB chain A(all domains)
UniProt: P30405 (all domains)
Gene: PPIF

Molecule: Peptidyl-prolyl cis-trans isomerase F, mitochondrial

3D Structure

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Related Domains

Browse other domains in Pro_isomerase →

Classification

AArchitecturebeta barrels(a.1)

XX-groupCyclophilin-like(75)

HH-groupCyclophilin-like(75.1)

TT-groupCyclophilin-like(75.1.1)

FFamilyPro_isomerase(75.1.1.1)

Ligands

in contact, ≤ 4 Å

3-[5-(chloromethyl)-1,2,4-oxadiazol-3-yl]aniline5MZ
O-acetaldehydyl-hexaethylene glycolP4C

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00160Pro_isomerase

Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

ClanCL0475Cyclophil-like

External Links

ECOD PDB View: 3RDB RCSB PDB: 3RDB PDBe: 3RDB UniProt: P30405

Downloads

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