ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rm4B2 - ECOD Domain | ECOD

ECOD/Domains/e1rm4B2

e1rm4B2

UID: 000097420

PDB

Range: B:1-148,B:313-333
PDB: 1RM4 chain B(all domains)
UniProt: P19866 (all domains)
Gene: GAPA

Molecule: Glyceraldehyde 3-phosphate dehydrogenase A

3D Structure

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Related Domains

Browse other domains in Gp_dh_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGp_dh_N(2003.1.1.1)

Ligands

in contact, ≤ 4 Å

NADPHNDP
drugDrugBank DB02338

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00044Gp_dh_N

Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1RM4 RCSB PDB: 1RM4 PDBe: 1RM4 UniProt: P19866

Downloads

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Drug annotations from DrugDomain.