ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4gcsB1 - ECOD Domain | ECOD

ECOD/Domains/e4gcsB1

e4gcsB1

UID: 000974431

PDB

Range: B:0-332
PDB: 4GCS chain B(all domains)
UniProt: P02931 (all domains)
Gene: ompF

Molecule: Outer membrane protein F

3D Structure

Loading viewer...

Related Domains

Browse other domains in Porin_1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupPorins(5084.5)

TT-groupPorin(5084.5.1)

FFamilyPorin_1(5084.5.1.1)

Ligands

in contact, ≤ 4 Å

(4R,5S)-3-({(3S,5S)-5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl}sulfanyl)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-4-methyl-4,5-dihydro-1H-pyrrole-2-carboxylic acid1RG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00267Porin_1

Gram-negative porin

ClanCL0193MBB

External Links

ECOD PDB View: 4GCS RCSB PDB: 4GCS PDBe: 4GCS UniProt: P02931

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure