ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rdkB1 - ECOD Domain | ECOD

ECOD/Domains/e3rdkB1

e3rdkB1

UID: 000975959

PDB

Range: B:5-333
PDB: 3RDK chain B(all domains)
UniProt: C6CRV0 (all domains)
Gene: xynA1

Molecule: Endo-1,4-beta-xylanase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_10 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_10(2002.1.1.18)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00331Glyco_hydro_10

Glycosyl hydrolase family 10

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3RDK RCSB PDB: 3RDK PDBe: 3RDK UniProt: C6CRV0

Downloads

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