ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4firF1 - ECOD Domain | ECOD

ECOD/Domains/e4firF1

e4firF1

UID: 000975997

PDB

Range: F:1-333
PDB: 4FIR chain F(all domains)
UniProt: O59080 (all domains)
Gene: pdxS

Molecule: Pyridoxal biosynthesis lyase pdxS

3D Structure

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Related Domains

Browse other domains in SOR_SNZ,ThiG →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilySOR_SNZ,ThiG(2002.1.1.72)

Ligands

in contact, ≤ 4 Å

Ribose-5-phosphateR5P
drugDrugBank DB02053

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01680SOR_SNZ

SOR/SNZ family

ClanCL0036TIM_barrel

Thiazole biosynthesis protein ThiG

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4FIR RCSB PDB: 4FIR PDBe: 4FIR UniProt: O59080

Downloads

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