ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1e5qF2 - ECOD Domain | ECOD

ECOD/Domains/e1e5qF2

e1e5qF2

UID: 000097681

PDB

Range: F:2-124,F:392-450
PDB: 1E5Q chain F(all domains)
UniProt: Q9P4R4 (all domains)
Gene: LYS3

Molecule: Saccharopine dehydrogenase [NADP(+), L-glutamate-forming]

3D Structure

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Related Domains

Browse other domains in Sacchrp_dh_NADP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilySacchrp_dh_NADP(2003.1.1.39)

Ligands

in contact, ≤ 4 Å

NADPHNDP
drugDrugBank DB02338
L-SaccharopineSHR
drugDrugBank DB04207

Shown in the structure viewer.

Pfam Families

PF03435Sacchrp_dh_NADP

Saccharopine dehydrogenase NADP binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1E5Q RCSB PDB: 1E5Q PDBe: 1E5Q UniProt: Q9P4R4

Downloads

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Drug annotations from DrugDomain.