ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yl7F2 - ECOD Domain | ECOD

ECOD/Domains/e1yl7F2

e1yl7F2

UID: 000097699

PDB

Range: F:2-105,F:215-245
PDB: 1YL7 chain F(all domains)
UniProt: P9WP23 (all domains)
Gene: dapB

Molecule: Dihydrodipicolinate reductase

3D Structure

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Related Domains

Browse other domains in DapB_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyDapB_N(2003.1.1.12)

Ligands

in contact, ≤ 4 Å

NADHNAI
drugDrugBank DB00157within 5 Å only
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

Dihydrodipicolinate reductase, N-terminus

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1YL7 RCSB PDB: 1YL7 PDBe: 1YL7 UniProt: P9WP23

Downloads

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Drug annotations from DrugDomain.