ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vikA1 - ECOD Domain | ECOD

ECOD/Domains/e3vikA1

e3vikA1

UID: 000977289

PDB

Range: A:21-492
PDB: 3VIK chain A(all domains)
UniProt: Q8T0W7 (all domains)
Gene: NkBG

Molecule: Beta-glucosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_1(2002.1.1.12)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00232Glyco_hydro_1

Glycosyl hydrolase family 1

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3VIK RCSB PDB: 3VIK PDBe: 3VIK UniProt: Q8T0W7

Downloads

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