ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rydB2 - ECOD Domain | ECOD

ECOD/Domains/e1rydB2

e1rydB2

UID: 000097799

PDB

Range: B:30-160,B:323-381
PDB: 1RYD chain B(all domains)
UniProt: Q07982 (all domains)
Gene: gfo

Molecule: glucose-fructose oxidoreductase

3D Structure

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Related Domains

Browse other domains in GFO_IDH_MocA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGFO_IDH_MocA(2003.1.1.22)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
NADPHNDP
drugDrugBank DB02338

+ 1 additive (Acetate)

Pfam Families

PF01408GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1RYD RCSB PDB: 1RYD PDBe: 1RYD UniProt: Q07982

Downloads

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AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.