ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bccA2 - ECOD Domain | ECOD

ECOD/Domains/e4bccA2

e4bccA2

UID: 000979584

PDB

Range: A:431-710
PDB: 4BCC chain A(all domains)
UniProt: P23687 (all domains)
Gene: PREP

Molecule: PROLYL ENDOPEPTIDASE

3D Structure

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Related Domains

Browse other domains in Peptidase_S9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta-Hydrolases(7579)

HH-groupalpha/beta-Hydrolases(7579.1)

TT-groupalpha/beta-Hydrolases(7579.1.1)

FFamilyPeptidase_S9(7579.1.1.3)

Ligands

in contact, ≤ 4 Å

Tris(Hydroxyethyl)AminomethaneTAM
drugDrugBank DB04237
tert-butyl N-[[1-[(3S,5S)-5-[(2S)-2-[azanyl(oxidanyl)methyl]pyrrolidin-1-yl]carbonyl-1-(4-phenylbutanoyl)pyrrolidin-3-yl]-1,2,3-triazol-4-yl]methyl]carbamateJKT

+ 1 additive (Glycerol)

Pfam Families

PF00326Peptidase_S9

Prolyl oligopeptidase family

ClanCL0028AB_hydrolase

External Links

ECOD PDB View: 4BCC RCSB PDB: 4BCC PDBe: 4BCC UniProt: P23687

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.