ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4j9vB3 - ECOD Domain | ECOD

ECOD/Domains/e4j9vB3

e4j9vB3

UID: 000980132

PDB

Range: B:1-139
PDB: 4J9V chain B(all domains)
UniProt: Q87KD2 (all domains)
Gene: VP3045

Molecule: Potassium uptake protein TrkA

3D Structure

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Related Domains

Browse other domains in TrkA_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyTrkA_N(2003.1.1.28)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930
Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

TrkA-N domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4J9V RCSB PDB: 4J9V PDBe: 4J9V UniProt: Q87KD2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.