ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4d8fD1 - ECOD Domain | ECOD

ECOD/Domains/e4d8fD1

e4d8fD1

UID: 000980499

PDB

Range: D:1-307
PDB: 4D8F chain D(all domains)
UniProt: O84835 (all domains)
Gene: nrdB

Molecule: Ribonucleoside-diphosphate reductase subunit beta

3D Structure

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Related Domains

Browse other domains in Ribonuc_red_sm →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFerritin/Heme oxygenase/4-helical cytokines(150)

HH-groupFerritin/Heme oxygenase(150.1)

TT-groupHeme oxygenase/Ribonucleotide reductase(150.1.2)

FFamilyRibonuc_red_sm(150.1.2.1)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00268Ribonuc_red_sm

Ribonucleotide reductase, small chain

ClanCL0044Ferritin

External Links

ECOD PDB View: 4D8F RCSB PDB: 4D8F PDBe: 4D8F UniProt: O84835

Downloads

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