ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4djnB1 - ECOD Domain | ECOD

ECOD/Domains/e4djnB1

e4djnB1

UID: 000980739

PDB

Range: B:0-298
PDB: 4DJN chain B(all domains)
UniProt: Q7LG56 (all domains)
Gene: RRM2B

Molecule: Ribonucleoside-diphosphate reductase subunit M2 B

3D Structure

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Related Domains

Browse other domains in Ribonuc_red_sm →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFerritin/Heme oxygenase/4-helical cytokines(150)

HH-groupFerritin/Heme oxygenase(150.1)

TT-groupHeme oxygenase/Ribonucleotide reductase(150.1.2)

FFamilyRibonuc_red_sm(150.1.2.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00268Ribonuc_red_sm

Ribonucleotide reductase, small chain

ClanCL0044Ferritin

External Links

ECOD PDB View: 4DJN RCSB PDB: 4DJN PDBe: 4DJN UniProt: Q7LG56

Downloads

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