ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4elmC2 - ECOD Domain | ECOD

ECOD/Domains/e4elmC2

e4elmC2

UID: 000980765

PDB

Range: C:1-175
PDB: 4ELM chain C(all domains)
UniProt: P11609 (all domains)
Gene: Cd1d1

Molecule: Antigen-presenting glycoprotein CD1d1

3D Structure

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Related Domains

Browse other domains in MHC_I_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMHC antigen-recognition domain(233)

HH-groupMHC antigen-recognition domain(233.1)

TT-groupMHC antigen-recognition domain(233.1.1)

FFamilyMHC_I_3(233.1.1.6)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Palmitic AcidPLM
drugDrugBank DB03796

Pfam Families

PF16497MHC_I_3

MHC-I family domain

ClanCL0343MHC

External Links

ECOD PDB View: 4ELM RCSB PDB: 4ELM PDBe: 4ELM UniProt: P11609

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl 3-O-sulfo-beta-D-galactopyranoside

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.