ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ldbB2 - ECOD Domain | ECOD

ECOD/Domains/e2ldbB2

e2ldbB2

UID: 000098121

PDB

Range: B:15-162
PDB: 2LDB chain B(all domains)
UniProt: P00344 (all domains)
Gene: ldh

Molecule: L-LACTATE DEHYDROGENASE

3D Structure

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Related Domains

Browse other domains in Ldh_1_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyLdh_1_N(2003.1.1.2)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
beta-D-fructofuranose 1,6-bisphosphateFBP
drugDrugBank DB04551within 5 Å only

Pfam Families

PF00056Ldh_1_N

lactate/malate dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2LDB RCSB PDB: 2LDB PDBe: 2LDB UniProt: P00344

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.