ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4hx9F1 - ECOD Domain | ECOD

ECOD/Domains/e4hx9F1

e4hx9F1

UID: 000981395

PDB

Range: F:1-156
PDB: 4HX9 chain F(all domains)
UniProt: Q9R5V5 (all domains)
Gene: ntd

Molecule: Nucleoside deoxyribosyltransferase

3D Structure

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Related Domains

Browse other domains in Nuc_deoxyrib_tr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupN-deoxyribosyltransferase(2007.15)

TT-groupN-deoxyribosyltransferase(2007.15.1)

FFamilyNuc_deoxyrib_tr(2007.15.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, Tetraethylene glycol)

Sulfate ionSO4
DrugBank DB14546
Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05014Nuc_deoxyrib_tr

Nucleoside 2-deoxyribosyltransferase

ClanCL0498Nribosyltransf

External Links

ECOD PDB View: 4HX9 RCSB PDB: 4HX9 PDBe: 4HX9 UniProt: Q9R5V5

Downloads

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