ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4e1cA1 - ECOD Domain | ECOD

ECOD/Domains/e4e1cA1

e4e1cA1

UID: 000981951

PDB

Range: A:-8-345
PDB: 4E1C chain A(all domains)
UniProt: A5F8C0 (all domains)

Molecule: VgrG protein

3D Structure

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Related Domains

Browse other domains in ACD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupGlutamine synthetase-like(321)

HH-groupC-terminal domain in VgrG(321.3)

TT-groupC-terminal domain in VgrG(321.3.1)

FFamilyACD(321.3.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Magnesium ionMG
metal

+ 2 additives (Glycerin, Sulfate ion)

Pfam Families

Actin cross-linking domain

External Links

ECOD PDB View: 4E1C RCSB PDB: 4E1C PDBe: 4E1C UniProt: A5F8C0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.