ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4dzwA1 - ECOD Domain | ECOD

ECOD/Domains/e4dzwA1

e4dzwA1

UID: 000981971

PDB

Range: A:1-360
PDB: 4DZW chain A(all domains)
UniProt: Q95WL3 (all domains)
Gene: C3747_22g238

Molecule: Farnesyl pyrophosphate synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

ISOPENTENYL PYROPHOSPHATEIPE
drugDrugBank DB04714
[2-(cyclohexylamino)ethane-1,1-diyl]bisphosphonic acid0MQ
Magnesium ionMG

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 4DZW RCSB PDB: 4DZW PDBe: 4DZW UniProt: Q95WL3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.