ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4e4hA1 - ECOD Domain | ECOD

ECOD/Domains/e4e4hA1

e4e4hA1

UID: 000982842

PDB

Range: A:179-503
PDB: 4E4H chain A(all domains)
UniProt: Q9H6W3 (all domains)
Gene: RIOX1

Molecule: Lysine-specific demethylase NO66

3D Structure

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Related Domains

Browse other domains in JmjC_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC_2(10.12.1.40)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511within 5 Å only

Shown in the structure viewer. Drug annotations from .

Pfam Families

JmjC domain

ClanCL0029Cupin

External Links

ECOD PDB View: 4E4H RCSB PDB: 4E4H PDBe: 4E4H UniProt: Q9H6W3

Downloads

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