ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4diqA1 - ECOD Domain | ECOD

ECOD/Domains/e4diqA1

e4diqA1

UID: 000982846

PDB

Range: A:181-509
PDB: 4DIQ chain A(all domains)
UniProt: Q9H6W3 (all domains)
Gene: RIOX1

Molecule: Lysine-specific demethylase NO66

3D Structure

Loading viewer...

Related Domains

Browse other domains in JmjC_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC_2(10.12.1.40)

Ligands

in contact, ≤ 4 Å

NICKEL (II) IONNI
metal
PYRIDINE-2,4-DICARBOXYLIC ACIDPD2

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

JmjC domain

ClanCL0029Cupin

External Links

ECOD PDB View: 4DIQ RCSB PDB: 4DIQ PDBe: 4DIQ UniProt: Q9H6W3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure