ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4e4hD1 - ECOD Domain | ECOD

ECOD/Domains/e4e4hD1

e4e4hD1

UID: 000982848

PDB

Range: D:179-506
PDB: 4E4H chain D(all domains)
UniProt: Q9H6W3 (all domains)
Gene: RIOX1

Molecule: Lysine-specific demethylase NO66

3D Structure

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Related Domains

Browse other domains in JmjC_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC_2(10.12.1.40)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

JmjC domain

ClanCL0029Cupin

External Links

ECOD PDB View: 4E4H RCSB PDB: 4E4H PDBe: 4E4H UniProt: Q9H6W3

Downloads

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