ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4df9E2 - ECOD Domain | ECOD

ECOD/Domains/e4df9E2

e4df9E2

UID: 000983147

PDB

Range: E:155-420
PDB: 4DF9 chain E(all domains)
UniProt: Q5L9L3 (all domains)
Gene: BF9343_3433

Molecule: putative peptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_M64 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M64(2498.1.1.37)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal
Zinc ionZN
metal

Pfam Families

PF09471Peptidase_M64

IgA Peptidase M64

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 4DF9 RCSB PDB: 4DF9 PDBe: 4DF9 UniProt: Q5L9L3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 3 additives (Phosphate ion, Nonaethylene glycol, Glycerol)

Phosphate ionPO4
DrugBank DB14523
Nonaethylene glycol2PE
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.