ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1kqpA1 - ECOD Domain | ECOD

ECOD/Domains/e1kqpA1

e1kqpA1

UID: 000009836

RepresentativePDB

Range: A:1-271
PDB: 1KQP chain A(all domains)
UniProt: P08164 (all domains)
Gene: nadE

Molecule: NH(3)-dependent NAD(+) synthetase

3D Structure

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Related Domains

Browse other domains in NAD_synthase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyNAD_synthase(2005.1.1.18)

Ligands

in contact, ≤ 4 Å

Nicotinamide-adenine-dinucleotide-adenylate intermediateADJ
Magnesium ionMG
metal
PYROPHOSPHATE 2-POP

Pfam Families

PF02540NAD_synthase

NAD synthase

ClanCL0039HUP

External Links

ECOD PDB View: 1KQP RCSB PDB: 1KQP PDBe: 1KQP UniProt: P08164

Downloads

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+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.