ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dblI1 - ECOD Domain | ECOD

ECOD/Domains/e4dblI1

e4dblI1

UID: 000983831

PDB

Range: I:1-248
PDB: 4DBL chain I(all domains)
UniProt: P06611 (all domains)
Gene: btuD

Molecule: Vitamin B12 import ATP-binding protein BtuD

3D Structure

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Related Domains

Browse other domains in ABC_tran →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyABC_tran(2004.1.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Phosphate ion, Sulfate ion)

Phosphate ionPO4
DrugBank DB14523
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00005ABC_tran

ABC transporter

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4DBL RCSB PDB: 4DBL PDBe: 4DBL UniProt: P06611

Downloads

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