ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gxmA1 - ECOD Domain | ECOD

ECOD/Domains/e4gxmA1

e4gxmA1

UID: 000984777

PDB

Range: A:0-398
PDB: 4GXM chain A(all domains)
UniProt: Q02899 (all domains)
Gene: OYE1

Molecule: NADPH dehydrogenase 1

3D Structure

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Related Domains

Browse other domains in Oxidored_FMN →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOxidored_FMN(2002.1.1.32)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
2-methyl-5-(prop-1-en-2-yl)phenol0WV
Chloride ionCL

Pfam Families

PF00724Oxidored_FMN

NADH:flavin oxidoreductase / NADH oxidase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4GXM RCSB PDB: 4GXM PDBe: 4GXM UniProt: Q02899

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sodium ionNA

metal

Magnesium ionMG

metalwithin 5 Å only

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.