ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zvsC1 - ECOD Domain | ECOD

ECOD/Domains/e3zvsC1

e3zvsC1

UID: 000985312

PDB

Range: C:1-160
PDB: 3ZVS chain C(all domains)
UniProt: O29917 (all domains)
Gene: amzA

Molecule: ARCHAEMETZINCIN

3D Structure

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Related Domains

Browse other domains in Peptidase_M54 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M54(2498.1.1.35)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07998Peptidase_M54

Peptidase family M54

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 3ZVS RCSB PDB: 3ZVS PDBe: 3ZVS UniProt: O29917

Downloads

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