ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ay8B1 - ECOD Domain | ECOD

ECOD/Domains/e4ay8B1

e4ay8B1

UID: 000986486

PDB

Range: B:1-331
PDB: 4AY8 chain B(all domains)
UniProt: Q8PXZ6 (all domains)
Gene: mtaA

Molecule: METHYLCOBALAMIN: COENZYME M METHYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in URO-D →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyURO-D(2002.1.1.57)

Ligands

in contact, ≤ 4 Å

Coenzyme MCOM
drugDrugBank DB09110
Zinc ionZN
metal

+ 1 additive (Glycerol)

Pfam Families

Uroporphyrinogen decarboxylase (URO-D)

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4AY8 RCSB PDB: 4AY8 PDBe: 4AY8 UniProt: Q8PXZ6

Downloads

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Glycerol

Shown in the structure viewer. Drug annotations from DrugDomain.