ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ebkB2 - ECOD Domain | ECOD

ECOD/Domains/e4ebkB2

e4ebkB2

UID: 000986973

PDB

Range: B:2-120
PDB: 4EBK chain B(all domains)
UniProt: D0E7M2 (all domains)
Gene: ant(4')-IIb

Molecule: Aminoglycoside nucleotidyltransferase

3D Structure

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Related Domains

Browse other domains in NTP_transf_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyNTP_transf_2(316.1.1.2)

Ligands

in contact, ≤ 4 Å

TobramycinTOY
drugDrugBank DB00684
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01909NTP_transf_2

Nucleotidyltransferase domain

ClanCL0260NTP_transf

External Links

ECOD PDB View: 4EBK RCSB PDB: 4EBK PDBe: 4EBK UniProt: D0E7M2

Downloads

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