ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4f8yB1 - ECOD Domain | ECOD

ECOD/Domains/e4f8yB1

e4f8yB1

UID: 000987459

PDB

Range: B:1-188
PDB: 4F8Y chain B(all domains)
UniProt: Q8DTD1 (all domains)
Gene: SMU_1420

Molecule: NADPH Quinone Oxidoreductase

3D Structure

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Related Domains

Browse other domains in Flavodoxin_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupFlavoproteins/Phosphotyrosine protein phosphatases-like(2007.2)

TT-groupFlavoproteins(2007.2.1)

FFamilyFlavodoxin_2(2007.2.1.2)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
MenadioneVK3
drugDrugBank DB00170

Shown in the structure viewer.

Pfam Families

PF02525Flavodoxin_2

Flavodoxin-like fold

ClanCL0042Flavoprotein

External Links

ECOD PDB View: 4F8Y RCSB PDB: 4F8Y PDBe: 4F8Y UniProt: Q8DTD1

Downloads

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Drug annotations from DrugDomain.