ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4iefA1 - ECOD Domain | ECOD

ECOD/Domains/e4iefA1

e4iefA1

UID: 000987464

PDB

Range: A:25-211
PDB: 4IEF chain A(all domains)
UniProt: P95493 (all domains)
Gene: rgpB

Molecule: Gingipain R2 Pro-Domain

3D Structure

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Related Domains

Browse other domains in Propeptide_C25 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupAgglutinin HPA-like(4182)

HH-groupAgglutinin HPA-like(4182.1)

TT-groupAgglutinin HPA-like(4182.1.1)

FFamilyPropeptide_C25(4182.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08126Propeptide_C25

Propeptide_C25

External Links

ECOD PDB View: 4IEF RCSB PDB: 4IEF PDBe: 4IEF UniProt: P95493

Downloads

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