ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ynqA1 - ECOD Domain | ECOD

ECOD/Domains/e2ynqA1

e2ynqA1

UID: 000987679

PDB

Range: A:-3-384
PDB: 2YNQ chain A(all domains)
UniProt: A4IKE6 (all domains)
Gene: GTNG_0418

Molecule: ESSB

3D Structure

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Related Domains

Browse other domains in YukC →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupEssB extracellular domain(109.28)

TT-groupEssB extracellular domain(109.28.1)

FFamilyYukC(109.28.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal

+ 2 additives (Glycerin, Malonate Ion)

GlycerinGOL

Pfam Families

WXG100 protein secretion system (Wss), protein YukC

ClanCL0016PKinase

External Links

ECOD PDB View: 2YNQ RCSB PDB: 2YNQ PDBe: 2YNQ UniProt: A4IKE6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Malonate IonMLI

DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.