ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ggfK1 - ECOD Domain | ECOD

ECOD/Domains/e4ggfK1

e4ggfK1

UID: 000988012

PDB

Range: K:1-89
PDB: 4GGF chain K(all domains)
UniProt: P05109 (all domains)
Gene: S100A8

Molecule: Protein S100-A8

3D Structure

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Related Domains

Browse other domains in S_100 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupEF-hand-related(108.1)

TT-groupEF-hand(108.1.1)

FFamilyS_100(108.1.1.8)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
MANGANESE (II) IONMN
metal

+ 2 additives (Glycerin, Sulfate ion)

Glycerin

Pfam Families

S-100/ICaBP type calcium binding domain

ClanCL0220EF_hand

External Links

ECOD PDB View: 4GGF RCSB PDB: 4GGF PDBe: 4GGF UniProt: P05109

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.