ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nekA3 - ECOD Domain | ECOD

ECOD/Domains/e1nekA3

e1nekA3

UID: 000098868

PDB

Range: A:3-235,A:356-450
PDB: 1NEK chain A(all domains)
UniProt: P0AC41 (all domains)
Gene: sdhA

Molecule: Succinate dehydrogenase flavoprotein subunit

3D Structure

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Related Domains

Browse other domains in FAD_binding_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyFAD_binding_2(2003.1.2.7)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Oxaloacetate IonOAA
drugDrugBank DB02637

Pfam Families

PF00890FAD_binding_2

FAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1NEK RCSB PDB: 1NEK PDBe: 1NEK UniProt: P0AC41

Downloads

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Calcium ion

metal

Shown in the structure viewer. Drug annotations from DrugDomain.